Publications

I have translated most of my Neotropical-focused papers into Spanish and posted those translations here. Please email me for pdfs of any of these articles if you do not have access via the journal websites.

He traducido al español la mayoría de mis artículos centrados en temas Neotropicales y he publicado esas traducciones aquí. Envíame un mensaje para una copia de cualquiera de estos artículos, si no tienes acceso por el sitio web de la revista.

In review

Hiller, A. E., Johnson, O., Moncrieff, A. E., and Salter, J. F. In press. Overgrown bill in a Northern Mockingbird (Mimus polyglottos) from West Texas, with a review of elongated bill deformities in the genus Mimus. Southwestern Naturalist

Published peer-reviewed articles

Johnson, O., Ribas, C.C., Aleixo, A., Naka, L.N., Harvey, M.G., and Brumfield, R.T. 2023. Amazonian birds in more dynamic habitats have less population genetic structure and higher gene flow. Molecular Ecology 00:1-21. https://doi.org/10.1111/mec.16886 [html][Español]

Freeman, B. G., Montgomery, G. A., Heavyside, J., Moncrieff, A. E., Johnson, O., and Winger, B. M. 2023. On the predictability of phenotypic divergence in geographic isolation. Evolution 77(1):26-35. doi:10.1093/evolut/qpac040 [html] [pdf]

Johnson, O. First record of the Yellow-bellied Flycatcher for the El Paso region of Texas. Western Birds 53(2):173-176. doi:10.21199/WB53.2.7 [html] [pdf] [Español]

Tobias, J. A., Sheard, C., Pigot, A. L., Devenish, A. J. M., Yang, J., [...] Johnson, O., [...], and 104 other authors. 2022. AVONET: morphological, ecological and geographical data for all birds. Ecology Letters 25:581-597. doi:10.1111/ele.13898. [html - open access] [data] Journal Cover (at left). Spanish translation available upon request.

Moncrieff, A. E., Johnson, O., Felix, C., Hiller, A. E., Corbett, E. C., Brady, M. L., Seeholzer, G. F., Bautista, E., Lane, D. F., and Harvey, M. G. 2020. Avifaunal surveys in the central Peruvian Amazon clarify range limits and highlight links between avian and habitat diversity. Wilson J. of Ornithology 132(4):934-951. doi:10.1676/20-00082 [html] [pdf] [supplement] [Español]

Johnson, O., Howard, J. T.*, and Brumfield, R. T. 2020. Systematics of a Neotropical clade of dead-leaf-foraging antwrens (Aves: Thamnophilidae; Epinecrophylla). Molecular Phylogenetics and Evolution 154:106962 doi:10.1016/j.ympev.2020.106962 [bioRxiv] [html] [pdf] [Español] [data: dryad, GenBank, code]
*denotes undergraduate co-author

Denzer, W., Manthey, U., Brady, M.L., and Johnson, O. 2020. Erstnachweis von Gonocephalus cf. abbotti (Cochran, 1922) auf Sumatra [First record of Gonocephalus cf. abbotti (Cochran, 1922) on Sumatra]. Sauria 42(4):49-56 [pdf] [html]

Haryoko, T., Johnson, O., Brady, M. L., Shakya, S. B., Irham, M., Yohanna, Ritonga, R. P., Prawiradilaga, D. M., and Sheldon, F. H. 2020. Recent ornithological expeditions to Siberut Island, Mt. Talamau and Rimbo Panti Nature Reserve, Sumatra, Indonesia. Treubia 47(1):13-38 [pdf] [html]

Monteza-Moreno, C. M., Castillo-Caballero, P. L., Johnson, O., and Angehr, G. R. 2020. First annotated checklist of birds of Jicarón and Jicarita: the southernmost islands of the Republic of Panama. Tecnociencia 22(2):123-149 [pdf] [Español]

Shakya, S. B., Irham, M., Brady, M. L., Haryoko, T., Fitriana, Y. S., Johnson, O., Moyle, R. G., Prawiradilaga, D. M., and Sheldon, F. H. 2020. Observations on the relationship of some Sundaic passerine taxa (Aves: Passeriformes) previously unavailable for molecular phylogenetic study. Journal of Ornithology doi:10.1007/s10336-020-01766-9 [html]

Capunitan, D., Johnson, O., Terrill, R. S., and Hird, S. 2020. Evolutionary signal in the gut microbiomes of 74 bird species from Equatorial Guinea. Molecular Ecology 29:829-847 [pdf] [html] [Español]

Salter, J. F., Johnson, O., Stafford III, N. J., Herrin Jr., W. F., Schilling, D., Cedotal, C., Brumfield, R. T., and Faircloth, B. C. 2019. A highly contiguous reference genome for Northern Bobwhite (Colinus virginianus). G3:Genes|Genomes|Genetics 9(12):3929-3932 [pdf] [html]

Moncrieff, A. E., Johnson, O., Lane, D. F., Álvarez Alonso, J., Balta, K., Eckhardt, K., Armenta, J., Valqui, T., Hernández, F., Soto Huaira, M., Mur, C., Harvey, M. G., Verde-Guerra, K., and Figueroa Ramírez, S. 2019. Avifaunal surveys along the lower Huallaga River, Region of Loreto, Peru: new distributional records, collection of topotypes, and taxonomic implications. Wilson J. of Ornithology 131(3):486-501. [pdf] [html] [supplement] [Español]

Moncrieff, A. E.*, Johnson, O.*, Lane, D. F., Beck, J. R., Angulo, F., and Fagan, J. 2018. A new species of antbird (Passeriformes: Thamnophilidae) from the Cordillera Azul, San Martín, Peru. The Auk: Ornithological Advances 135:114-126. [pdf] [html] [Español]
*denotes co-lead authorship

Johnson, O. 2017. Notes on the nesting behavior of the Gray-mantled Wren (Odontorchilus branickii). Ornitología Neotropical 28:175-179. [pdf] [html] [Español]

Cooper, J. C., Johnson, O., Davis, T. J., Terrill, R. S., Wolfe, J. D., Brzeski, K. E., Motove Etingüe, A., and Powell, L. L. 2017. Notes on the distribution of the avifauna of Bioko Island, Equatorial Guinea, including one new country record. Malimbus 39:1-15. [pdf] [Español]

Shizuka, D., Chaine, A. S., Anderson, J., Johnson, O.*, Laursen, I. M., and Lyon, B. E. 2014. Across-year social stability shapes network structure in wintering migrant sparrows. Ecology Letters 17:998-1007. [pdf] [html]
*denotes undergraduate co-author

Johnson, O. and Billings, M. J. 2014. The Mangrove Yellow Warbler reaches California. Western Birds. 45:160-162. [pdf] [html]

Johnson, O., Pyle, P., and Tietz, J. 2013. The subspecies of the Song Sparrow on Southeast Farallon Island and in central California. Western Birds 44:162–170. [pdf] [html]

Johnson, O., Sullivan, B. S., and McCaskie, G. 2012. The 36th report of the California Bird Records Committee: 2010 records. Western Birds 43:164–188. [pdf] [html]

Johnson, O. 2010. Primer registro de rascón café (Amaurolimnas concolor) en Monteverde, Puntarenas, Costa Rica [First record of the Uniform Crake (Amaurolimnas concolor) in Monteverde, Puntarenas, Costa Rica]. Zeledonia 14:57–58. [pdf] [html]

Non peer-reviewed publications

Johnson, O. 2020. Pearly-breasted Conebill (Conirostrum margaritae), version 1.0, In Birds of the World (T. S. Schulenberg, Editor). Cornell Lab of Ornithology, Ithaca, NY, USA. [html]

Johnson, O. 2009. Review: Birds of the US-Mexico Borderlands: Distribution, Ecology, and Conservation, by J. Ruth, T. Brush, and D. Krueper, associate editors. Western Birds 41:60-61. [pdf] [html] [book link]

Taxonomic proposals

The following documents are proposals submitted to avian classification committees to revise current taxonomic treatments. Each proposal is a synthesis of both published and novel data as it relates to taxonomy, especially species limits. Proposals are considered by two committees of the American Ornithological Society; the North American Classification Committee (NACC) and the South American Classification Committee (SACC). Results of each proposal, once publicly available, are listed after the citation.

Johnson, O., and Hernández-Baños, B. E. 2022. Split Anthracothorax aurulentus from A. dominicus (Antillean Mango). NACC. [pdf] [html]

Johnson, O., and Hernández-Baños, B. E. 2022. Recognize Riccordia elegans as a species, subspecies, or doubtful taxon. NACC. [pdf] [html]

Johnson, O., and Hernández-Baños, B. E. 2022. Split Piaya cayana into two species (Squirrel Cuckoo). NACC. [pdf] [html]

Johnson, O. 2021. A taxonomic revision of the genus Chondrohierax. NACC. [pdf] [html]

Johnson, O. 2021. Change the linear sequence of species in Epinecrophylla. SACC. [pdf] [html]

Johnson, O., and Hernández-Baños, B. E. 2021. Taxonomic rearrangements in the Pampa curvipennis complex. NACC. [pdf] [html]

Johnson, O., and Rasmussen, P. C. 2021. Revise the taxonomy of the Estrildidae. NACC. [pdf] [html] Passed.

Johnson, O. 2020. Split Band-rumped Storm-Petrel Hydrobates castro into three species. NACC. [pdf] [html] Option B passed - elevate Hydrobates monteiroi to species status